Researchers have developed an algorithm to detect DNA damage in the blood. Researchers have shown that identifying DNA damage susceptibility in adults is strongly associated with a future cancer diagnosis. This project seeks to continue this research to investigate whether this biomarker may also be predictive of childhood cancer. Algorithms are instructions used by a computer and can be used to analyze data, and this particular algorithm uses data from Whole Genome Sequencing. Sequencing the DNA, or identifying all of the genes present in tumor samples is important for better understanding cancers and creating treatments. Whole Genome Sequencing (WGS) does this for the entire set of genes present in a cell. Access to the Pediatric Brain Tumor Atlas will provide researchers with the data necessary to pursue this analysis on pediatric brain cancer data.
What are the goals of this project?
Researchers will use newly developed algorithms to analyze data on pediatric brain cancer patients in an effort to identify possible measures of cancer risk, such as DNA damage susceptibility.
What is the impact of this project?
Previous research has shown that identifying DNA damage susceptibility is related to cancer risk in adult patients. This study seeks to expand upon this work to include pediatric brain cancer patients to improve clinical outcomes.
Why is the CBTN request important to this project?
The Pediatric Brain Tumor Atlas gives researchers the Whole Genome Sequencing data across brain cancer types necessary for analysis by newly developed algorithms.
The Children's Brain Tumor Network contributed to this project by providing access to the Pediatric Brain Tumor Atlas.
PI: Mark Cowley
Adam Resnick, PhD
Adam Resnick is the Director of Data Driven Discovery in Biomedicine (D3b) at Children’s Hospital of Philadelphia (CHOP) responsible for leading a multidisciplinary team to build and support a scalable, patient-focused healthcare and educational discovery ecosystem on behalf of all children. He is a
Children’s Hospital of Philadelphia
Children’s Hospital of PhiladelphiaJoined on
Operations Center for the Children’s Brain Tumor Tissue Consortium, the Children’s Hospital of Philadelphia (CHOP) is currently ranked 1st nationally for their Pediatric Cancer Program by U.S. News & World Report. CHOP’s Biobank is home to the CBTTC’s pediatric brain and CNS tumor biorepository; the