Landscape of Tumor-infiltrating T cell Repertoire of Pediatric Brain Tumors
Email Principal InvestigatorGary Kohanbash
CBTN Data
CBTN Participants
Backer
Brain Tumor Funders' Collaborative
St Baldrick's Foundation
About this
Project
The cellular immune system, mediated by specialized cells called T-cells, is responsible for detecting and combating microorganisms that may cause disease such as bacteria and viruses. T-cell receptors (TCRs) are highly specialized receptors on the outside of cells. Knowledge of TCRs can characterize the T-cell immune status in patients. The ability to assess T-cell-mediated immunity in individual patients during cancer progression might enable the identification of patient-specific biomarkers that predict therapeutic efficacy and response. The extraordinary diversity of TCRs is a major bottleneck to determine the specificity of a given T cell. Understanding the immune environment, including the incidence and classification of T cell receptors of pediatric brain tumors is necessary for the development of immune-based therapies. Immune repertoire deep sequencing at the genomic DNA or cancer DNA level is limited by the availability of tumor tissue for sequencing. Access to sequencing data in the Pediatric Brain Tumor Atlas will allow researchers to complete this research and work towards new targeted therapies across pediatric brain cancer types.
Ask The
Scientists
What are the goals of this project?
The goals of this project are to identify and classify T cell receptors in pediatric brain tumors, which is a necessary step in the development of immune-based therapies.
What is the impact of this project?
Through the increased knowledge of T cell receptors in pediatric brain tumors, this research will open the door to new T cell based cancer therapeutics.
Why is the CBTN request important to this project?
Quality tissue samples for DNA and RNA sequencing are rare to come by, which makes the sequencing data available through the Pediatric Brain Tumor Atlas invaluable to this work.
Specimen Data
The Children's Brain Tumor Network contributed to this project by providing access to the Pediatric Brain Tumor Atlas.
Meet The
Team
Other collaborator:
Udai Kammula (UPMC)
Pittsburgh, PA, USA
Pittsburgh, PA, USA
Washington, DC, USA
Washington, DC, USA
San Francisco and Oakland, CA, USA
Pittsburgh, PA, USA
Institutions
Primary
UPMC Children's Hospital of Pittsburgh
Joined onThe Neuro-Oncology Program at UPMC Children’s Hospital is at the center of finding new and improved treatments for pediatric brain and nervous system cancers. As one of the leading sites in the United States for childhood neurologic cancer research and clinical studies, UPMC Children’s brain tumor p
Primary
Children’s National Hospital
Joined onEach year, the Brain Tumor Institute at Children’s National evaluates more than 100 new patients with brain tumors, and is recognized as a world leader in childhood brain tumor care and research. Children’s National has pioneered novel pediatric brain tumor therapies, including new molecularly-targe
Primary
UCSF Benioff Children's Hospital
Joined onThe Pediatric Brain Tumor Center at UCSF Benioff Children’s Hospital, with campuses in San Francisco and Oakland, harnesses the power of world-class experts from all disciplines related to child brain health, including neurology, neurosurgery, neurocritical care, neurogenetics, neuro-oncology, rehab
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